mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rvdgz3rl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 20:55:30,066 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 20:55:30,881 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 20:55:31,055 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 20:55:31,975 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 20:55:32,131 - cnv_pipe.batch.run_model - INFO - Processing cluster 419 with 200 probes
2026-06-05 20:55:32,520 - cnv_pipe.batch.run_model.cluster419 - INFO - Child process started for cluster 419 with 200 probes
2026-06-05 20:56:31,599 - cnv_pipe.batch.run_model.cluster419 - INFO - Child process finished cluster 419. Wrote cluster_419_samples.csv and cluster_419_params.csv
2026-06-05 20:56:31,601 - cnv_pipe.batch.run_model - INFO - Cluster 419 finished in 59.47 seconds. Status: SUCCESS