File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/3d8cb7e7664d9c27175d036573d3cd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9t8p5b7f because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:41,673 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:42,578 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:42,761 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:43,768 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:43,950 - cnv_pipe.batch.run_model - INFO - Processing cluster 867 with 194 probes
2026-06-08 17:40:44,349 - cnv_pipe.batch.run_model.cluster867 - INFO - Child process started for cluster 867 with 194 probes
2026-06-08 17:41:46,903 - cnv_pipe.batch.run_model.cluster867 - INFO - Child process finished cluster 867. Wrote cluster_867_samples.csv and cluster_867_params.csv
2026-06-08 17:41:46,905 - cnv_pipe.batch.run_model - INFO - Cluster 867 finished in 62.95 seconds. Status: SUCCESS