File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/5c64da6b8481758d74ecfa7b9b7ca4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mya372r6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:32,276 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:33,157 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:33,338 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:34,524 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:34,598 - cnv_pipe.batch.run_model - INFO - Processing cluster 1206 with 112 probes
2026-06-08 17:41:34,986 - cnv_pipe.batch.run_model.cluster1206 - INFO - Child process started for cluster 1206 with 112 probes
2026-06-08 17:42:11,750 - cnv_pipe.batch.run_model.cluster1206 - INFO - Child process finished cluster 1206. Wrote cluster_1206_samples.csv and cluster_1206_params.csv
2026-06-08 17:42:11,751 - cnv_pipe.batch.run_model - INFO - Cluster 1206 finished in 37.15 seconds. Status: SUCCESS