File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/23a69023eca4f09dd632339289faa8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r4b4i8b6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:23,439 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:24,308 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:24,489 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:25,510 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:25,589 - cnv_pipe.batch.run_model - INFO - Processing cluster 1151 with 186 probes
2026-06-08 17:41:26,070 - cnv_pipe.batch.run_model.cluster1151 - INFO - Child process started for cluster 1151 with 186 probes
2026-06-08 17:42:23,560 - cnv_pipe.batch.run_model.cluster1151 - INFO - Child process finished cluster 1151. Wrote cluster_1151_samples.csv and cluster_1151_params.csv
2026-06-08 17:42:23,561 - cnv_pipe.batch.run_model - INFO - Cluster 1151 finished in 57.97 seconds. Status: SUCCESS