File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/5f2f79d46b0700dc0e6dab8967e23c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z632d0_u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:57,045 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:58,024 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:58,208 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:59,242 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:59,419 - cnv_pipe.batch.run_model - INFO - Processing cluster 1178 with 198 probes
2026-06-08 17:41:59,807 - cnv_pipe.batch.run_model.cluster1178 - INFO - Child process started for cluster 1178 with 198 probes
2026-06-08 17:43:02,736 - cnv_pipe.batch.run_model.cluster1178 - INFO - Child process finished cluster 1178. Wrote cluster_1178_samples.csv and cluster_1178_params.csv
2026-06-08 17:43:02,738 - cnv_pipe.batch.run_model - INFO - Cluster 1178 finished in 63.32 seconds. Status: SUCCESS