File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/1fc86bdc40715b11e6f09a66dd1673/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_tissue)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/1fc86bdc40715b11e6f09a66dd1673/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/5263249033ac2a54e194fa7c7f6622/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/f5537db24d1f64533c648bf30bb8b9/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/76792c7e20b4a876036e4941e78b20/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/08345bf17cfe83f5c784701a48eb4c/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/7797af8302a8f26e69c3e29f326378/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/1fc86bdc40715b11e6f09a66dd1673/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/f236054d835bbbb7ee6ef7d250c5d0/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/4878b2ee6f62d54bf6272c8c4b4326/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/851144e0745f80f75a1e0e82a69c44/Sig_18_tissue.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory