mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kiyxaq0e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:44,259 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:45,166 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:45,349 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:46,413 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:46,592 - cnv_pipe.batch.run_model - INFO - Processing cluster 561 with 190 probes
2026-06-08 17:39:46,996 - cnv_pipe.batch.run_model.cluster561 - INFO - Child process started for cluster 561 with 190 probes
2026-06-08 17:40:47,031 - cnv_pipe.batch.run_model.cluster561 - INFO - Child process finished cluster 561. Wrote cluster_561_samples.csv and cluster_561_params.csv
2026-06-08 17:40:47,033 - cnv_pipe.batch.run_model - INFO - Cluster 561 finished in 60.44 seconds. Status: SUCCESS