File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/a4afc9321b96f7cf7f553e0d2d85fc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5y5il_dq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:46,146 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:46,988 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:47,155 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:48,084 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:48,298 - cnv_pipe.batch.run_model - INFO - Processing cluster 930 with 190 probes
2026-06-08 17:40:48,684 - cnv_pipe.batch.run_model.cluster930 - INFO - Child process started for cluster 930 with 190 probes
2026-06-08 17:41:45,822 - cnv_pipe.batch.run_model.cluster930 - INFO - Child process finished cluster 930. Wrote cluster_930_samples.csv and cluster_930_params.csv
2026-06-08 17:41:45,824 - cnv_pipe.batch.run_model - INFO - Cluster 930 finished in 57.53 seconds. Status: SUCCESS