File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/cc8474226a4f4fe940c44965050881/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q7rpsolm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:45:44,699 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:45:45,563 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:45:45,744 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:45:46,736 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:45:46,900 - cnv_pipe.batch.run_model - INFO - Processing cluster 2649 with 181 probes
2026-06-08 17:45:47,279 - cnv_pipe.batch.run_model.cluster2649 - INFO - Child process started for cluster 2649 with 181 probes
2026-06-08 17:46:39,381 - cnv_pipe.batch.run_model.cluster2649 - INFO - Child process finished cluster 2649. Wrote cluster_2649_samples.csv and cluster_2649_params.csv
2026-06-08 17:46:39,382 - cnv_pipe.batch.run_model - INFO - Cluster 2649 finished in 52.48 seconds. Status: SUCCESS