File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/56dd1c7495d8aab94da92b02956d7b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rmfe_jaf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:22,542 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:23,405 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:23,581 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:24,640 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:24,809 - cnv_pipe.batch.run_model - INFO - Processing cluster 1146 with 185 probes
2026-06-08 17:41:25,184 - cnv_pipe.batch.run_model.cluster1146 - INFO - Child process started for cluster 1146 with 185 probes
2026-06-08 17:42:22,391 - cnv_pipe.batch.run_model.cluster1146 - INFO - Child process finished cluster 1146. Wrote cluster_1146_samples.csv and cluster_1146_params.csv
2026-06-08 17:42:22,393 - cnv_pipe.batch.run_model - INFO - Cluster 1146 finished in 57.58 seconds. Status: SUCCESS