Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/e17377b35e49d0d7a10a77b1aaa13f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/e17377b35e49d0d7a10a77b1aaa13f/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/474fc143f880c2f634844ebc39c681/positive_somatic_control_1.snv_indel.phased.vep.vcf.gz
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 173 variants, labeled 0 as HOTSPOT