File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/9cb8bee0a4fa4bee0f32c878c21a90/.command.err
Size
1.2 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5yi4_0z2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:38:24,214 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:38:25,173 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:38:25,367 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:38:26,361 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:38:26,527 - cnv_pipe.batch.run_model - INFO - Processing cluster 79 with 186 probes
2026-06-08 17:38:26,977 - cnv_pipe.batch.run_model.cluster79 - INFO - Child process started for cluster 79 with 186 probes
2026-06-08 17:39:31,112 - cnv_pipe.batch.run_model.cluster79 - INFO - Child process finished cluster 79. Wrote cluster_79_samples.csv and cluster_79_params.csv
2026-06-08 17:39:31,113 - cnv_pipe.batch.run_model - INFO - Cluster 79 finished in 64.59 seconds. Status: SUCCESS