File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/a2862616d600b73e5ced337a70dbc2/.command.err
Size
1.2 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6lqrsho3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:38:14,204 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:38:15,069 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:38:15,238 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:38:16,148 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:38:16,308 - cnv_pipe.batch.run_model - INFO - Processing cluster 29 with 145 probes
2026-06-08 17:38:16,679 - cnv_pipe.batch.run_model.cluster29 - INFO - Child process started for cluster 29 with 145 probes
2026-06-08 17:39:01,119 - cnv_pipe.batch.run_model.cluster29 - INFO - Child process finished cluster 29. Wrote cluster_29_samples.csv and cluster_29_params.csv
2026-06-08 17:39:01,120 - cnv_pipe.batch.run_model - INFO - Cluster 29 finished in 44.81 seconds. Status: SUCCESS