Loading PON positions from pon_tnseq_42_curated_v4.vcf.gz Loaded 550,680 PON positions Loading POT positions from aih_tumor_1577_pot_1pct_artifacts_only.vcf.gz Loaded 545 POT positions Hard filter summary: 144 variants processed, 0 PASS low_tumor_dp: 36 low_normal_dp: 144 low_tumor_alt: 29 high_normal_vaf: 83 panel_of_normals: 60 panel_of_tumors: 0