mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5poneqne because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:10,490 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:11,343 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:11,516 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:12,563 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:12,725 - cnv_pipe.batch.run_model - INFO - Processing cluster 359 with 173 probes
2026-06-08 17:39:13,106 - cnv_pipe.batch.run_model.cluster359 - INFO - Child process started for cluster 359 with 173 probes
2026-06-08 17:40:07,265 - cnv_pipe.batch.run_model.cluster359 - INFO - Child process finished cluster 359. Wrote cluster_359_samples.csv and cluster_359_params.csv
2026-06-08 17:40:07,266 - cnv_pipe.batch.run_model - INFO - Cluster 359 finished in 54.54 seconds. Status: SUCCESS