Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/af0c565907198621c40991bd318828/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/3bb13a2653e5e0965e884ab23ec76b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/af0c565907198621c40991bd318828/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/3bb13a2653e5e0965e884ab23ec76b/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T17:36:19.626648Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:19.639945Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:19.639977Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:19.639982Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:19.639986Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXGEakLc'
[2026-06-08T17:36:19.639990Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:19.639995Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:19.639999Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:19.640003Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-08T17:36:19.640006Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:19.640010Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:19.640013Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:19.640017Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:19.640021Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:19.640862Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:19.640969Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:19.646977Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:19.647802Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:19.647928Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:19.648310Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:19.648563Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.648987Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649083Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649156Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649273Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649339Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649457Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649520Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649642Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.649880Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.650279Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.650386Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.650726Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.651482Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.651925Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.653604Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.654104Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:19.654183Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.654420Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.654677Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.654972Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655224Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655338Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655407Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655517Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655579Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655696Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655758Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655868Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.655933Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656043Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656110Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656298Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656623Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656746Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656810Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656922Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.656986Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657094Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657156Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657274Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657340Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657452Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657515Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657621Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657685Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.657939Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658390Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658512Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658579Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658688Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658753Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658861Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.658924Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.659055Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.659117Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.659225Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.659293Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.659604Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.659996Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660110Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660171Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660285Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660351Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660463Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660566Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660674Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.660736Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.661474Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.662009Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.662133Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.662200Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.662314Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.662378Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.663778Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664359Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664491Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664560Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664670Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664736Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664846Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.664911Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665023Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665085Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665197Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665294Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665488Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665605Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.665861Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.666452Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.666818Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.667480Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.668251Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.668868Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.668982Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.669046Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.669157Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.669218Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.684721Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.685344Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.685532Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.686443Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.686677Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.686902Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.686986Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.687292Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.687657Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.687881Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.688183Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.688776Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.689312Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.689841Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:19.690743Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:19.691170Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.692857Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:19.693607Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.695898Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.696546Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-08T17:36:19.697457Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.703068Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-08T17:36:19.703628Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:19.707057Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-08T17:36:19.710915Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-08T17:36:19.711644Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-08T17:36:19.714166Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:19.777467Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.777527Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.778327Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.778630Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.780879Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.781391Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-08T17:36:19.784096Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:19.784216Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.787343Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:19.848242Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.848315Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.849208Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.849719Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:19.852689Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-08T17:36:19.853725Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-08T17:36:20.314938Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.315926Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.318971Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-08T17:36:20.630774Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.631853Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.634694Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T17:36:20.663743Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.664647Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.667426Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T17:36:20.696495Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.697370Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.699292Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.700218Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-08T17:36:20.700684Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.703505Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-08T17:36:20.704534Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.705432Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.708160Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-08T17:36:20.819957Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.820909Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.823474Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-08T17:36:20.852896Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.853844Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.856471Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-08T17:36:20.918040Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.918983Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.921584Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-08T17:36:21.083564Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.084592Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.087381Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-08T17:36:21.198960Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.199980Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.202999Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T17:36:21.264126Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.265146Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.268225Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:21.329374Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.330449Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.333381Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:21.394496Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.395494Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.398529Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T17:36:21.459675Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.460681Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.463796Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-08T17:36:21.524984Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.525993Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.528958Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T17:36:21.558099Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.559086Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.562100Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-08T17:36:21.591312Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.592273Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.594985Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-08T17:36:21.656356Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.657333Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.659913Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-08T17:36:21.689301Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.690281Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.692792Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-08T17:36:21.754564Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.755454Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.758801Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-08T17:36:22.020384Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.021360Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.024051Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-08T17:36:22.053366Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.054377Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.057160Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-08T17:36:22.086513Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.087417Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.090030Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T17:36:22.151462Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.152438Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.155860Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-08T17:36:22.467460Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.468333Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.471321Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-08T17:36:22.500595Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.501466Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.504358Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-08T17:36:22.533417Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.534373Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.537036Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-08T17:36:22.566314Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.567190Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.569843Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-08T17:36:22.599241Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.600111Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.603166Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-08T17:36:22.664578Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.665486Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.668469Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:22.697539Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.698426Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.700963Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-08T17:36:22.730502Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.730584Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.731366Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.731862Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.735057Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T17:36:22.736277Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:22.764042Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.764873Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.767399Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-08T17:36:22.829083Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.829160Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.829905Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.830238Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.833350Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-08T17:36:22.835027Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-08T17:36:22.862758Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.863607Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.866562Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:22.927723Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.928537Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.931527Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-08T17:36:23.193605Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.194591Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.197748Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-08T17:36:23.459420Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.460317Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.463375Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T17:36:23.492336Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.493160Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.496099Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:23.557379Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.558265Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.561252Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-08T17:36:23.590527Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.591379Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.594332Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:23.655648Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.656454Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.659666Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-08T17:36:23.720856Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.721686Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.724792Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-08T17:36:23.753946Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.754750Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.757456Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T17:36:23.758428Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.759013Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.761941Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-08T17:36:23.790980Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.791047Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.791705Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.792213Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.795373Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-08T17:36:23.796258Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T17:36:23.825020Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.825087Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.825737Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.826132Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.829800Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:23.830453Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:23.858782Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.859578Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.862578Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-08T17:36:23.891586Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.891680Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.892326Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.892841Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.895790Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T17:36:23.897149Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:23.925095Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.925791Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.929133Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:23.990379Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.991116Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.994422Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-08T17:36:24.023348Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.024119Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.027051Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-08T17:36:24.056055Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.056734Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.059735Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-08T17:36:24.088802Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.089504Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.092370Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-08T17:36:24.153871Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.154593Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.157962Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-08T17:36:24.469703Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.470372Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.473181Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-08T17:36:24.502472Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.503172Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.506254Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-08T17:36:24.868413Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.869055Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.871954Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-08T17:36:24.901118Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.901762Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.904717Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-08T17:36:24.966242Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.966924Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.970094Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-08T17:36:24.998851Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.999511Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.002318Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-08T17:36:25.364482Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.364572Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.365146Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.365543Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.368812Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-08T17:36:25.369577Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-08T17:36:25.397668Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.397752Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.398350Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.398628Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.401450Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-08T17:36:25.402664Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T17:36:25.431034Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.431918Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.432259Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.434204Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.434778Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-08T17:36:25.437274Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:25.498815Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.498912Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.499455Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.499799Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.502757Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T17:36:25.503771Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-08T17:36:25.531880Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.532460Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.535303Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T17:36:25.536280Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.536803Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.539634Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:25.568754Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.600776Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.601295Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.604244Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T17:36:25.633338Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.797701Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.797772Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.798256Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.798553Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.801212Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-08T17:36:25.802231Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-08T17:36:25.831925Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.832004Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.996371Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.997007Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.999715Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T17:36:26.029236Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.494435Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.494961Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.497663Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-08T17:36:26.527108Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.092405Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.092882Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.095896Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-08T17:36:27.124883Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.644777Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.645217Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.647794Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-08T17:36:29.677113Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.677371Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.677482Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.677705Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.678244Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.682058Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:29.683089Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:29.684100Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:29.710247Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.710306Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.710326Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.710500Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.710930Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.713646Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:29.714222Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:29.742939Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.743000Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.743172Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.745717Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:29.774997Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.239998Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:38.528811Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:38.528811Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] 
[2026-06-08T17:36:38.528811Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:38.528871Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] 
[2026-06-08T17:36:38.528878Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:38.528885Z] [nf-823bb13a2653e5e0965e884ab23ec76b-291b8-cx9h7] [603_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec