Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/af0c565907198621c40991bd318828/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/efe30818d2b090136dde4d27747f31/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b2/af0c565907198621c40991bd318828/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/efe30818d2b090136dde4d27747f31/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T17:36:20.741275Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:20.748134Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:20.748167Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:20.748174Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:20.748183Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXEHJYGp'
[2026-06-08T17:36:20.748188Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:20.748194Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:20.748199Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:20.748203Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-08T17:36:20.748206Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:20.748211Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:20.748216Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:20.748219Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:20.748224Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:20.748935Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:20.749078Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:20.754863Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:20.755711Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:20.755810Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:20.756394Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:20.756741Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.757495Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.757590Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.757663Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.757794Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.758081Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.758523Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.758719Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.758810Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.758974Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.759687Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.761605Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.761895Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.762147Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.762223Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.762636Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:20.762928Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.763107Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.763494Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.763676Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.763900Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.763971Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764087Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764155Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764268Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764330Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764455Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764522Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764631Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.764892Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765315Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765409Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765529Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765593Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765701Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765765Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765874Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.765937Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.766046Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.766112Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.766227Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.766381Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.766814Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767261Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767395Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767465Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767589Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767653Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767876Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.767947Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.768061Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.768127Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.768240Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.768469Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.768954Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769019Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769132Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769200Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769307Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769372Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769485Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769548Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769658Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769722Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769833Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.769919Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.770301Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.770770Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.770888Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.770954Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.771063Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.771126Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.771234Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.771297Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.772825Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.773511Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.773647Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.773720Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.773837Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.773910Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774023Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774089Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774205Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774269Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774384Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774453Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.774798Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.775483Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.775598Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.775662Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.775795Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.775864Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.775978Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.776046Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.776160Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.776223Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.776333Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.776401Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.792939Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.793451Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.793620Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.793841Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.795056Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.795123Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.795410Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.795538Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.795860Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.796032Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.796681Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.797006Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.797542Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:20.798060Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.798364Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:20.799288Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.800639Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.801835Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.803955Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.805041Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T17:36:20.808584Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T17:36:20.811030Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T17:36:20.815672Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T17:36:20.820921Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T17:36:20.821524Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T17:36:20.826063Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T17:36:20.827784Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T17:36:20.940950Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.941038Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.941060Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.941856Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.942290Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.942959Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:20.947180Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T17:36:20.948495Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T17:36:20.949816Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T17:36:21.057661Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.058590Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.062560Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T17:36:21.123142Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.124065Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.127262Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T17:36:21.188451Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.189361Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.192370Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T17:36:21.904930Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.905897Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.909417Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T17:36:21.938373Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.939328Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:21.942487Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T17:36:22.153800Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.154871Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.158015Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T17:36:22.219466Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.220496Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.223722Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T17:36:22.224463Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.225260Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.228105Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T17:36:22.257167Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.258143Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.261380Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T17:36:22.290488Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.291419Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.295515Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T17:36:22.323497Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.324534Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.327589Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T17:36:22.332301Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.333196Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.336193Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T17:36:22.365383Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.366307Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.369332Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T17:36:22.398676Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.399622Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.402658Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T17:36:22.463809Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.463908Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.464814Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.465412Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.469106Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T17:36:22.470125Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T17:36:22.580193Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.581221Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.584747Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T17:36:22.696242Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.697287Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.700617Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T17:36:22.761679Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.762759Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.766106Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T17:36:22.827480Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.828520Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.831525Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T17:36:22.892922Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.893968Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.897448Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T17:36:22.958447Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.959496Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:22.964001Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T17:36:23.024235Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.025237Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.028806Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T17:36:23.029530Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.030415Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.033661Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T17:36:23.094778Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.095707Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.099000Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T17:36:23.160655Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.161650Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.164879Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T17:36:23.276520Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.277490Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.281080Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T17:36:23.342236Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.343156Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.347173Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T17:36:23.407751Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.408689Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.412162Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T17:36:23.523296Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.524498Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.528080Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T17:36:23.789985Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.790092Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.790987Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.791616Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.795268Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T17:36:23.796831Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T17:36:23.857665Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.857764Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.858643Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.858993Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.863317Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T17:36:23.892785Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.893852Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.896892Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T17:36:23.898112Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.898787Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.901724Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T17:36:23.905408Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T17:36:23.906697Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.906757Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.907534Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.907968Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.911429Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T17:36:23.912541Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T17:36:23.972854Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.973125Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.973152Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.973174Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.973203Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.973984Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.974641Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.975437Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.977830Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.978044Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T17:36:23.979979Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:23.981387Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T17:36:23.986416Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T17:36:23.988081Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T17:36:23.989261Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T17:36:24.045972Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.046049Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.046797Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.047140Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.050611Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T17:36:24.051502Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T17:36:24.112022Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.112848Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.116354Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T17:36:24.117061Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.117105Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.117678Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.117978Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.121449Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T17:36:24.122582Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T17:36:24.182630Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.183446Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.186905Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T17:36:24.247954Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.248800Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.252352Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T17:36:24.313435Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.314295Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.317410Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T17:36:24.347019Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.347857Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.351584Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T17:36:24.356145Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.356913Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.360547Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T17:36:24.389480Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.390279Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.393580Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T17:36:24.454703Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.454805Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.455556Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.455991Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.460033Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T17:36:24.460840Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:24.570480Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.571312Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.575098Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T17:36:24.636576Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.637393Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.641058Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T17:36:24.702084Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.702912Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.706454Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T17:36:24.767758Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.768604Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.771817Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T17:36:24.833160Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.833946Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.837783Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T17:36:24.898823Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.899600Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.902987Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T17:36:24.964195Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.964322Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.965028Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.965525Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:24.969311Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T17:36:24.970453Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T17:36:25.030234Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.030333Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.031013Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.031362Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.034954Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T17:36:25.035948Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T17:36:25.096003Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.096760Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.099990Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T17:36:25.161214Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.162044Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.166846Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T17:36:25.227974Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.228742Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.232108Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T17:36:25.293379Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.294129Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.297735Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T17:36:25.358692Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.359439Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.363146Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T17:36:25.424136Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.424884Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.428612Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T17:36:25.690902Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.691617Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:25.695390Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T17:36:26.258294Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.258963Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.262347Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T17:36:26.323511Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.324224Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.327893Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:26.388845Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.389539Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.393386Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:26.454159Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.454812Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.458574Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T17:36:26.519482Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.519575Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.520230Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.520595Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.524136Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T17:36:26.525998Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T17:36:26.586170Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.586240Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.586262Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.586790Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.587130Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.590569Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T17:36:26.591414Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T17:36:26.651664Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.651793Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.684331Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.684910Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.688259Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T17:36:26.749450Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.749558Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.750122Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.753342Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T17:36:26.814550Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.928997Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.929578Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:26.932807Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T17:36:26.993871Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.026078Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.026614Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.029747Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T17:36:27.091160Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.556916Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.557471Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.560642Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T17:36:27.622029Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.622421Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.622604Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.622942Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.623849Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.628880Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:27.630322Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:27.632150Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:27.657607Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.658008Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.658518Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.658840Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.662708Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:27.663437Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.664171Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:27.695252Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.695321Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.695556Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:27.698893Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:27.728028Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.400322Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:39.636866Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:39.636866Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] 
[2026-06-08T17:36:39.636866Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:39.636942Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] 
[2026-06-08T17:36:39.636949Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:39.636956Z] [nf-87efe30818d2b090136dde4d27747f31-41f26-767wt] [650_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec