mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-drhxkz7r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:41,575 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:42,635 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:42,833 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:44,022 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:44,100 - cnv_pipe.batch.run_model - INFO - Processing cluster 543 with 120 probes
2026-06-08 17:39:44,554 - cnv_pipe.batch.run_model.cluster543 - INFO - Child process started for cluster 543 with 120 probes
2026-06-08 17:40:28,452 - cnv_pipe.batch.run_model.cluster543 - INFO - Child process finished cluster 543. Wrote cluster_543_samples.csv and cluster_543_params.csv
2026-06-08 17:40:28,453 - cnv_pipe.batch.run_model - INFO - Cluster 543 finished in 44.35 seconds. Status: SUCCESS