File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/1791fc04c704dba5e4b035afec89b7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1hlwd6ai because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:36,155 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:37,017 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:37,197 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:38,239 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:38,316 - cnv_pipe.batch.run_model - INFO - Processing cluster 1227 with 196 probes
2026-06-08 17:41:38,815 - cnv_pipe.batch.run_model.cluster1227 - INFO - Child process started for cluster 1227 with 196 probes
2026-06-08 17:42:38,746 - cnv_pipe.batch.run_model.cluster1227 - INFO - Child process finished cluster 1227. Wrote cluster_1227_samples.csv and cluster_1227_params.csv
2026-06-08 17:42:38,747 - cnv_pipe.batch.run_model - INFO - Cluster 1227 finished in 60.43 seconds. Status: SUCCESS