[2026-06-08T17:36:28.064193Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T17:36:28.071571Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T17:36:28.071618Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T17:36:28.071634Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T17:36:28.071645Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXSCzk2E'
[2026-06-08T17:36:28.071653Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T17:36:28.071660Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T17:36:28.071666Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T17:36:28.071670Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-08T17:36:28.071674Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T17:36:28.071678Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T17:36:28.071687Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T17:36:28.071693Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T17:36:28.071703Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T17:36:28.072533Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T17:36:28.072669Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T17:36:28.081183Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T17:36:28.081967Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T17:36:28.082285Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T17:36:28.082602Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T17:36:28.082930Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.083739Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.083840Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.083916Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.084037Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.084531Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.084652Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.085002Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.085488Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.086123Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.086240Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.086576Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.088799Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.089518Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T17:36:28.089827Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.090088Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.090553Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.090628Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.090754Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.090822Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091022Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091125Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091248Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091317Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091433Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091545Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.091876Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092209Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092329Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092396Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092507Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092583Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092694Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092756Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092868Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.092933Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.093043Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.093108Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.093257Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.093383Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.093795Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094120Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094241Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094308Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094417Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094488Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094631Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094754Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094873Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.094939Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.095049Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.095115Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.095226Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.095511Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096042Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096113Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096231Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096301Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096412Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096479Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096606Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096670Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096787Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096856Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.096968Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.097199Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.097866Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.097936Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098052Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098117Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098228Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098291Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098398Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.098462Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.100101Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.100795Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.100933Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.101005Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.101148Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.101681Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.101794Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.101919Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.102383Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.102919Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103035Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103104Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103252Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103330Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103442Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103523Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103639Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103708Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103816Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.103883Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.104165Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.104858Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.104990Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.105127Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.119500Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.119613Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.119702Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.120125Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.121148Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.121313Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.121391Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.121526Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.121597Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T17:36:28.121649Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T17:36:28.138808Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.139873Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.140167Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.140585Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.141335Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.142399Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.143953Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.144951Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.146229Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.150211Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T17:36:28.157590Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T17:36:28.157998Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T17:36:28.164699Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T17:36:28.169372Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T17:36:28.169889Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T17:36:28.172840Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T17:36:28.173629Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T17:36:28.275047Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.275151Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.275187Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.276241Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.276734Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.277288Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.283965Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T17:36:28.285402Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T17:36:28.286765Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T17:36:28.642851Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.643887Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.648201Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T17:36:28.809874Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.810991Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.815093Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T17:36:28.926327Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.927438Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:28.931164Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T17:36:29.042496Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.043618Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.047493Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T17:36:29.158750Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.159837Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.163552Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T17:36:29.475657Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.476724Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.480070Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T17:36:29.992517Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.993622Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:29.997497Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T17:36:30.057985Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.059056Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.062826Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T17:36:30.123544Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.124152Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.125354Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.125771Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.129334Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T17:36:30.131164Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T17:36:30.158179Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.159261Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.162560Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T17:36:30.176199Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.177157Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.180721Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T17:36:30.209516Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.209618Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.210572Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.210942Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.214650Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T17:36:30.216660Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T17:36:30.227710Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.228744Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.232369Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T17:36:30.261314Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.262329Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.266426Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T17:36:30.294635Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.295862Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.299463Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T17:36:30.360769Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.360854Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.361866Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.362393Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.365950Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T17:36:30.366981Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T17:36:30.427196Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.428202Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.431775Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T17:36:30.492549Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.493551Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.496972Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T17:36:30.758726Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.761004Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.764306Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T17:36:30.825688Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.826710Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:30.830410Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T17:36:31.091827Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.092752Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.096178Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T17:36:31.157329Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.158585Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.158909Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.161824Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.163315Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T17:36:31.164411Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T17:36:31.226218Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.226327Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.227137Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.227426Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.231083Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T17:36:31.231933Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T17:36:31.292036Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.292960Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.296360Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T17:36:31.407734Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.408640Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.412343Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T17:36:31.473200Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.474090Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.477386Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T17:36:31.538432Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.538534Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.539397Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.539707Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.543286Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T17:36:31.544639Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T17:36:31.604662Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.604770Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.605577Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.605958Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.609266Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T17:36:31.610525Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T17:36:31.671801Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.671913Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.672693Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.673011Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.676797Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T17:36:31.677732Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T17:36:31.705870Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.706675Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.709707Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T17:36:31.710605Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.711398Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.714746Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T17:36:31.743579Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.744369Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:31.747426Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T17:36:32.008822Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.009695Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.012924Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T17:36:32.074052Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.074838Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.077967Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T17:36:32.139130Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.139914Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.143695Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T17:36:32.305109Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.305957Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.311249Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:32.370967Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.371859Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.375572Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T17:36:32.587197Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.587284Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.588065Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.588554Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.592749Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T17:36:32.593906Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T17:36:32.653660Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.653733Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.653757Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.654494Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.654952Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.655494Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.656739Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.659970Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T17:36:32.663990Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.666287Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T17:36:32.668236Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T17:36:32.669626Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T17:36:32.696396Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.697118Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.700111Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T17:36:32.713274Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.713969Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.716844Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T17:36:32.778446Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.778529Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.779215Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.779887Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.784826Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T17:36:32.785950Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T17:36:32.845053Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.845815Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.848803Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T17:36:32.910032Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.910130Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.910796Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.911151Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.914027Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T17:36:32.915217Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T17:36:32.943447Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.944475Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.944719Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.946073Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:32.948699Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T17:36:32.949970Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T17:36:33.060562Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.061367Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.064507Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T17:36:33.126170Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.126823Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.131157Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T17:36:33.192227Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.192903Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.196984Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:33.257815Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.258568Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.262612Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T17:36:33.323519Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.324280Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.328423Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T17:36:33.389250Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.389981Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.393518Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T17:36:33.398239Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.398809Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.401989Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T17:36:33.463020Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.463109Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.463160Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.463800Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.464528Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.465224Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.469610Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T17:36:33.471285Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T17:36:33.473026Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T17:36:33.532826Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.532922Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.532961Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.533557Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.534061Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.534503Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.540102Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T17:36:33.542346Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T17:36:33.543610Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T17:36:33.599300Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.600000Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.603569Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T17:36:33.604387Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.604938Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.608247Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T17:36:33.669259Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.669832Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.673670Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T17:36:33.835188Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.835292Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.835872Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.836394Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.840219Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T17:36:33.841845Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T17:36:33.901549Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.902117Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T17:36:33.906015Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T17:36:33.967120Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.332110Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.332197Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.332703Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.334958Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.335932Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T17:36:34.339396Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.339888Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T17:36:34.340292Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.343444Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T17:36:34.372380Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.373883Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.375245Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.740295Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.740372Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.740807Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.741297Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.744597Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T17:36:34.745560Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T17:36:34.805501Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:34.805577Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.019825Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.020293Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.022895Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T17:36:35.052277Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.166703Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.167134Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.169724Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T17:36:35.199132Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.199413Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.199553Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.199826Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.200582Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.206761Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T17:36:35.208412Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T17:36:35.209688Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T17:36:35.232898Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.233151Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.235972Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T17:36:35.236715Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.236914Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.239902Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T17:36:35.240886Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.272650Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.272711Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.272881Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T17:36:35.275730Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T17:36:35.305045Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T17:36:38.677504Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T17:36:46.960481Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T17:36:46.960481Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] 
[2026-06-08T17:36:46.960481Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T17:36:46.960541Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] 
[2026-06-08T17:36:46.960548Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T17:36:46.960556Z] [nf-d72a72ae53d22b2a362bf6b56b605c0b-46918-88w64] [602_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec