File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/7ad051721df46f9e2851fc5df2081d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-36jg6_cb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:42,693 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:43,459 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:43,616 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:44,433 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:44,567 - cnv_pipe.batch.run_model - INFO - Processing cluster 914 with 139 probes
2026-06-08 17:40:44,939 - cnv_pipe.batch.run_model.cluster914 - INFO - Child process started for cluster 914 with 139 probes
2026-06-08 17:41:26,927 - cnv_pipe.batch.run_model.cluster914 - INFO - Child process finished cluster 914. Wrote cluster_914_samples.csv and cluster_914_params.csv
2026-06-08 17:41:26,927 - cnv_pipe.batch.run_model - INFO - Cluster 914 finished in 42.36 seconds. Status: SUCCESS