File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/82f0bcfd9e987caefd577d649e48f7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wgrjp9na because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:45:26,103 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:45:26,893 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:45:27,062 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:45:27,976 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:45:28,126 - cnv_pipe.batch.run_model - INFO - Processing cluster 2613 with 192 probes
2026-06-08 17:45:28,503 - cnv_pipe.batch.run_model.cluster2613 - INFO - Child process started for cluster 2613 with 192 probes
2026-06-08 17:46:23,528 - cnv_pipe.batch.run_model.cluster2613 - INFO - Child process finished cluster 2613. Wrote cluster_2613_samples.csv and cluster_2613_params.csv
2026-06-08 17:46:23,529 - cnv_pipe.batch.run_model - INFO - Cluster 2613 finished in 55.40 seconds. Status: SUCCESS