File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/82fc7f176c05957a23ccf4441c666e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-81zcqmk6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:06,219 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:07,114 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:07,292 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:08,297 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:08,480 - cnv_pipe.batch.run_model - INFO - Processing cluster 337 with 195 probes
2026-06-08 17:39:08,874 - cnv_pipe.batch.run_model.cluster337 - INFO - Child process started for cluster 337 with 195 probes
2026-06-08 17:40:09,548 - cnv_pipe.batch.run_model.cluster337 - INFO - Child process finished cluster 337. Wrote cluster_337_samples.csv and cluster_337_params.csv
2026-06-08 17:40:09,550 - cnv_pipe.batch.run_model - INFO - Cluster 337 finished in 61.07 seconds. Status: SUCCESS