File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/6f1da4f0dfd63e0eb5436ff5b5ee12/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lybi4lbb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:38:57,171 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:38:58,052 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:38:58,230 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:38:59,270 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:38:59,454 - cnv_pipe.batch.run_model - INFO - Processing cluster 282 with 186 probes
2026-06-08 17:38:59,830 - cnv_pipe.batch.run_model.cluster282 - INFO - Child process started for cluster 282 with 186 probes
2026-06-08 17:39:56,954 - cnv_pipe.batch.run_model.cluster282 - INFO - Child process finished cluster 282. Wrote cluster_282_samples.csv and cluster_282_params.csv
2026-06-08 17:39:56,956 - cnv_pipe.batch.run_model - INFO - Cluster 282 finished in 57.50 seconds. Status: SUCCESS