File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/7da35ccaf96413fb5d7d9f7022d32b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8vn_h9__ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:19,101 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:19,964 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:20,136 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:21,144 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:21,220 - cnv_pipe.batch.run_model - INFO - Processing cluster 694 with 139 probes
2026-06-08 17:40:21,756 - cnv_pipe.batch.run_model.cluster694 - INFO - Child process started for cluster 694 with 139 probes
2026-06-08 17:41:06,371 - cnv_pipe.batch.run_model.cluster694 - INFO - Child process finished cluster 694. Wrote cluster_694_samples.csv and cluster_694_params.csv
2026-06-08 17:41:06,373 - cnv_pipe.batch.run_model - INFO - Cluster 694 finished in 45.15 seconds. Status: SUCCESS