File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/9eed11d3ae1ea9ecf7a47c2f26e2f3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3lfdkuin because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:27,832 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:28,694 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:28,869 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:29,869 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:30,066 - cnv_pipe.batch.run_model - INFO - Processing cluster 466 with 196 probes
2026-06-08 17:39:30,513 - cnv_pipe.batch.run_model.cluster466 - INFO - Child process started for cluster 466 with 196 probes
2026-06-08 17:40:29,961 - cnv_pipe.batch.run_model.cluster466 - INFO - Child process finished cluster 466. Wrote cluster_466_samples.csv and cluster_466_params.csv
2026-06-08 17:40:29,962 - cnv_pipe.batch.run_model - INFO - Cluster 466 finished in 59.90 seconds. Status: SUCCESS