File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ca/745b79171177bdf2cc54b44c2e1762/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xkgsqg18 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:06,634 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:07,586 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:07,777 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:08,813 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:08,969 - cnv_pipe.batch.run_model - INFO - Processing cluster 332 with 137 probes
2026-06-08 17:39:09,415 - cnv_pipe.batch.run_model.cluster332 - INFO - Child process started for cluster 332 with 137 probes
2026-06-08 17:39:58,788 - cnv_pipe.batch.run_model.cluster332 - INFO - Child process finished cluster 332. Wrote cluster_332_samples.csv and cluster_332_params.csv
2026-06-08 17:39:58,789 - cnv_pipe.batch.run_model - INFO - Cluster 332 finished in 49.82 seconds. Status: SUCCESS