File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/f374f82edce50be6da8063046af0fd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o1hqxm64 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:29,978 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:30,854 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:31,025 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:32,027 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:32,199 - cnv_pipe.batch.run_model - INFO - Processing cluster 833 with 183 probes
2026-06-08 17:40:32,584 - cnv_pipe.batch.run_model.cluster833 - INFO - Child process started for cluster 833 with 183 probes
2026-06-08 17:41:30,150 - cnv_pipe.batch.run_model.cluster833 - INFO - Child process finished cluster 833. Wrote cluster_833_samples.csv and cluster_833_params.csv
2026-06-08 17:41:30,152 - cnv_pipe.batch.run_model - INFO - Cluster 833 finished in 57.95 seconds. Status: SUCCESS