mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9bjd_f2w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:00,216 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:01,167 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:01,344 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:02,324 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:02,488 - cnv_pipe.batch.run_model - INFO - Processing cluster 300 with 200 probes
2026-06-08 17:39:02,864 - cnv_pipe.batch.run_model.cluster300 - INFO - Child process started for cluster 300 with 200 probes
2026-06-08 17:40:04,410 - cnv_pipe.batch.run_model.cluster300 - INFO - Child process finished cluster 300. Wrote cluster_300_samples.csv and cluster_300_params.csv
2026-06-08 17:40:04,412 - cnv_pipe.batch.run_model - INFO - Cluster 300 finished in 61.92 seconds. Status: SUCCESS