File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6f/6f6d77d16e8ca67cea68c9fdcf26b2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-izx5r_y3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:10,722 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:11,672 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:11,860 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:12,903 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:13,106 - cnv_pipe.batch.run_model - INFO - Processing cluster 721 with 196 probes
2026-06-08 17:40:13,497 - cnv_pipe.batch.run_model.cluster721 - INFO - Child process started for cluster 721 with 196 probes
2026-06-08 17:41:15,204 - cnv_pipe.batch.run_model.cluster721 - INFO - Child process finished cluster 721. Wrote cluster_721_samples.csv and cluster_721_params.csv
2026-06-08 17:41:15,205 - cnv_pipe.batch.run_model - INFO - Cluster 721 finished in 62.10 seconds. Status: SUCCESS