Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/bcea7a7bd798bd4d6c2883b020fd45/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/bcea7a7bd798bd4d6c2883b020fd45/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/efd966eb4fa8058fc23b61baf49ac5/negative_somatic_control_1.strelka.somatic_indels.vcf.gz ==> STAGING COMPLETE (4 inputs) Lines total/split/joined/realigned/mismatch_removed/dup_removed/skipped: 62/0/0/0/0/0/0