mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fon3r7qq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:58,697 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:59,564 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:59,737 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:00,729 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:00,895 - cnv_pipe.batch.run_model - INFO - Processing cluster 577 with 162 probes
2026-06-08 17:40:01,282 - cnv_pipe.batch.run_model.cluster577 - INFO - Child process started for cluster 577 with 162 probes
2026-06-08 17:40:53,384 - cnv_pipe.batch.run_model.cluster577 - INFO - Child process finished cluster 577. Wrote cluster_577_samples.csv and cluster_577_params.csv
2026-06-08 17:40:53,385 - cnv_pipe.batch.run_model - INFO - Cluster 577 finished in 52.49 seconds. Status: SUCCESS