File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/75cd2536de25b39b1707e554690eac/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1t0d8w78 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:54,405 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:55,252 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:55,425 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:56,415 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:56,619 - cnv_pipe.batch.run_model - INFO - Processing cluster 1274 with 187 probes
2026-06-08 17:41:57,009 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process started for cluster 1274 with 187 probes
2026-06-08 17:42:53,911 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process finished cluster 1274. Wrote cluster_1274_samples.csv and cluster_1274_params.csv
2026-06-08 17:42:53,912 - cnv_pipe.batch.run_model - INFO - Cluster 1274 finished in 57.29 seconds. Status: SUCCESS