File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/721b68f875c6ae981ea5cbd6433bf9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5jzb1apn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:00,704 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:01,597 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:01,771 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:02,811 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:03,001 - cnv_pipe.batch.run_model - INFO - Processing cluster 662 with 183 probes
2026-06-08 17:40:03,396 - cnv_pipe.batch.run_model.cluster662 - INFO - Child process started for cluster 662 with 183 probes
2026-06-08 17:41:00,658 - cnv_pipe.batch.run_model.cluster662 - INFO - Child process finished cluster 662. Wrote cluster_662_samples.csv and cluster_662_params.csv
2026-06-08 17:41:00,659 - cnv_pipe.batch.run_model - INFO - Cluster 662 finished in 57.66 seconds. Status: SUCCESS