#!/bin/bash -Ceuo pipefail
flowcell_qc.py \
     --runinfo RunInfo.xml --tile-metrics TileMetricsOut.bin \
    --demux-stats ds*/* \
    --quality-metrics qm*/* \
    --index-hopping ih*/* \
    --output flowcell_qc.csv

cat <<-END_VERSIONS > versions.yml
"DAQ:FLOWCELL_QC":
    python: $(python --version | sed 's/Python //g')
    interop: $(python -c 'import interop; print(interop.__version__)' 2>/dev/null || echo 'N/A')
    flowcell_qc: 1.2.0
END_VERSIONS