File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/e059c1821234328b7420fe565a1460/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6rrff7eg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:19,710 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:20,635 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:20,819 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:21,884 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:21,963 - cnv_pipe.batch.run_model - INFO - Processing cluster 414 with 166 probes
2026-06-08 17:39:22,462 - cnv_pipe.batch.run_model.cluster414 - INFO - Child process started for cluster 414 with 166 probes
2026-06-08 17:40:14,927 - cnv_pipe.batch.run_model.cluster414 - INFO - Child process finished cluster 414. Wrote cluster_414_samples.csv and cluster_414_params.csv
2026-06-08 17:40:14,928 - cnv_pipe.batch.run_model - INFO - Cluster 414 finished in 52.97 seconds. Status: SUCCESS