File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/35c6f57f444be12206a87b7dd07f35/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vxo1az56 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:49,126 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:49,956 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:50,135 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:51,121 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:51,288 - cnv_pipe.batch.run_model - INFO - Processing cluster 950 with 158 probes
2026-06-08 17:40:51,658 - cnv_pipe.batch.run_model.cluster950 - INFO - Child process started for cluster 950 with 158 probes
2026-06-08 17:41:39,845 - cnv_pipe.batch.run_model.cluster950 - INFO - Child process finished cluster 950. Wrote cluster_950_samples.csv and cluster_950_params.csv
2026-06-08 17:41:39,846 - cnv_pipe.batch.run_model - INFO - Cluster 950 finished in 48.56 seconds. Status: SUCCESS