File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/381c095d0ca7bfcb80d1eae047a59b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qybd4vkr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:44,507 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:45,495 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:45,694 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:46,847 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:46,926 - cnv_pipe.batch.run_model - INFO - Processing cluster 915 with 190 probes
2026-06-08 17:40:47,397 - cnv_pipe.batch.run_model.cluster915 - INFO - Child process started for cluster 915 with 190 probes
2026-06-08 17:41:52,699 - cnv_pipe.batch.run_model.cluster915 - INFO - Child process finished cluster 915. Wrote cluster_915_samples.csv and cluster_915_params.csv
2026-06-08 17:41:52,701 - cnv_pipe.batch.run_model - INFO - Cluster 915 finished in 65.78 seconds. Status: SUCCESS