File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/3422c0fbf4671344c91af3f10483ad/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-485plu9j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:42:00,545 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:42:01,814 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:42:02,102 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:42:03,893 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:42:04,139 - cnv_pipe.batch.run_model - INFO - Processing cluster 1264 with 185 probes
2026-06-08 17:42:04,744 - cnv_pipe.batch.run_model.cluster1264 - INFO - Child process started for cluster 1264 with 185 probes
2026-06-08 17:43:37,293 - cnv_pipe.batch.run_model.cluster1264 - INFO - Child process finished cluster 1264. Wrote cluster_1264_samples.csv and cluster_1264_params.csv
2026-06-08 17:43:37,296 - cnv_pipe.batch.run_model - INFO - Cluster 1264 finished in 93.16 seconds. Status: SUCCESS