File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/74cc0eae9af91a53f41aee78d6a935/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-26zxfsae because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:55,953 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:56,793 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:56,964 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:58,056 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:58,146 - cnv_pipe.batch.run_model - INFO - Processing cluster 1188 with 186 probes
2026-06-08 17:41:58,522 - cnv_pipe.batch.run_model.cluster1188 - INFO - Child process started for cluster 1188 with 186 probes
2026-06-08 17:42:55,148 - cnv_pipe.batch.run_model.cluster1188 - INFO - Child process finished cluster 1188. Wrote cluster_1188_samples.csv and cluster_1188_params.csv
2026-06-08 17:42:55,150 - cnv_pipe.batch.run_model - INFO - Cluster 1188 finished in 57.00 seconds. Status: SUCCESS