Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/8efaa0b4aa244440d75fe95e964b5a/.command.sh Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/8efaa0b4aa244440d75fe95e964b5a/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/39fc4609d5b3bb227efea5d5dd4332/Sig_18_Blood.recalibrated.bam.bai Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/39fc4609d5b3bb227efea5d5dd4332/Sig_18_Blood.recalibrated.bam Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz ==> STAGING COMPLETE (10 inputs) [W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXRtToJC/chr6_138229684-138229952.bed.gz.tbi [W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXRtToJC/chr6_138229684-138229952.bed.gz.tbi Successfully created workflow run script. To execute the workflow, run the following script and set appropriate options: /var/tmp/strelka/runWorkflow.py [W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXRtToJC/chr6_138229684-138229952.bed.gz.tbi [2026-06-08T17:36:35.876420Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Initiating pyFlow run [2026-06-08T17:36:35.877258Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow [2026-06-08T17:36:35.877277Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] pyFlowVersion: 1.1.20 [2026-06-08T17:36:35.877283Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0 [2026-06-08T17:36:35.877292Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXRtToJC' [2026-06-08T17:36:35.877302Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8' [2026-06-08T17:36:35.877313Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] mode: local [2026-06-08T17:36:35.877319Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] nCores: 8 [2026-06-08T17:36:35.877327Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] memMb: 3047507 [2026-06-08T17:36:35.877333Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data [2026-06-08T17:36:35.877341Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] isDryRun: False [2026-06-08T17:36:35.877347Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] isContinue: False [2026-06-08T17:36:35.877356Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] isForceContinue: True [2026-06-08T17:36:35.877362Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [RunParameters] mailTo: '' [2026-06-08T17:36:35.878076Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow [2026-06-08T17:36:35.878151Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10 [2026-06-08T17:36:35.884180Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow [2026-06-08T17:36:35.884879Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow [2026-06-08T17:36:35.885087Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow [2026-06-08T17:36:35.885346Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow [2026-06-08T17:36:35.885625Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.886146Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.886305Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.886389Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.886513Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.886582Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.886729Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.887131Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.887205Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.887592Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.888002Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.888533Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.890185Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.890440Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node [2026-06-08T17:36:35.890963Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891183Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891313Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891383Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891501Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891564Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891767Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891834Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.891946Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.892014Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.892124Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.892248Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.892642Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.892885Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893001Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893079Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893190Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893273Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893406Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893469Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893582Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893647Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893781Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.893918Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.894341Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.894624Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.894743Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.894807Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.894919Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.894982Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895088Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895152Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895264Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895377Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895495Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895559Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895714Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.895862Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.896101Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.896693Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.897086Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.897450Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898037Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898102Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898209Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898274Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898386Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898447Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898560Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898624Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898732Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898798Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898908Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.898970Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.899296Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.899755Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.899870Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.899939Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.900044Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.900109Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.901550Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902214Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902343Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902413Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902526Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902595Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902708Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902771Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902884Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.902948Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.903054Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.903123Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.903302Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.903562Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904231Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904302Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904421Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904487Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904642Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904708Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904825Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.904887Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.905004Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.905065Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.905219Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.905568Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906363Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906440Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906559Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906628Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906743Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906812Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.906923Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.907040Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.907156Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.907221Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.909819Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.910649Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.910913Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.910980Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.926628Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:35.926809Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.927570Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.927915Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.928052Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.928571Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.928625Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.928998Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.929468Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.930152Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.930694Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.930992Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.931578Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.932684Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.933438Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.933716Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.934343Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome' [2026-06-08T17:36:35.934950Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:35.935320Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow [2026-06-08T17:36:35.939401Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node [2026-06-08T17:36:35.942369Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node [2026-06-08T17:36:35.947413Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node [2026-06-08T17:36:35.951771Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node [2026-06-08T17:36:35.956148Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node [2026-06-08T17:36:35.958546Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node [2026-06-08T17:36:35.959911Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node [2026-06-08T17:36:36.049430Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node [2026-06-08T17:36:36.073898Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:36.073973Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:36.075056Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:36.075379Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:36.080371Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node [2026-06-08T17:36:36.081801Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node [2026-06-08T17:36:36.542870Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:36.544129Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:36.547758Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node [2026-06-08T17:36:37.009856Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.011363Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.015444Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node [2026-06-08T17:36:37.226672Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.227888Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.231024Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node [2026-06-08T17:36:37.342550Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.343988Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.347147Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node [2026-06-08T17:36:37.408372Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.408443Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.409528Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.409866Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.413636Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node [2026-06-08T17:36:37.414674Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node [2026-06-08T17:36:37.474047Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.475169Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.478221Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node [2026-06-08T17:36:37.539443Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.540541Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.543805Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node [2026-06-08T17:36:37.604884Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.605980Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.609485Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node [2026-06-08T17:36:37.638724Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.639761Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.642872Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node [2026-06-08T17:36:37.704096Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.705682Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.706033Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.708556Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.708877Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node [2026-06-08T17:36:37.712218Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node [2026-06-08T17:36:37.773111Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.776921Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:37.778031Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.778418Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:37.782557Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node [2026-06-08T17:36:37.783813Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node [2026-06-08T17:36:38.094712Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.095941Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.099587Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node [2026-06-08T17:36:38.160503Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.161692Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.165560Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node [2026-06-08T17:36:38.226410Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.227534Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.231506Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node [2026-06-08T17:36:38.292215Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.293344Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.296847Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node [2026-06-08T17:36:38.301392Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.302301Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.305933Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node [2026-06-08T17:36:38.366632Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.367716Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.371831Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node [2026-06-08T17:36:38.432387Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.433528Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.437446Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node [2026-06-08T17:36:38.548364Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.549518Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.552978Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node [2026-06-08T17:36:38.557695Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.558515Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.561902Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node [2026-06-08T17:36:38.622599Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.623646Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.627544Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node [2026-06-08T17:36:38.656128Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.657274Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.660472Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node [2026-06-08T17:36:38.721584Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.722582Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.725649Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node [2026-06-08T17:36:38.786691Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:38.787764Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:38.791244Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node [2026-06-08T17:36:39.153092Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.154148Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.158213Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node [2026-06-08T17:36:39.268710Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.269746Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.272835Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node [2026-06-08T17:36:39.333839Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.334786Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.337842Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node [2026-06-08T17:36:39.366908Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.367784Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.370788Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node [2026-06-08T17:36:39.400028Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.400910Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.402857Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.403868Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.404494Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node [2026-06-08T17:36:39.407928Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node [2026-06-08T17:36:39.468684Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.468760Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.469649Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.469967Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.473711Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node [2026-06-08T17:36:39.475303Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node [2026-06-08T17:36:39.534638Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.534740Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.535706Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.536280Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.540989Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node [2026-06-08T17:36:39.542473Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node [2026-06-08T17:36:39.601776Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.601857Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.602757Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.603319Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.607718Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node [2026-06-08T17:36:39.608952Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node [2026-06-08T17:36:39.668424Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.668502Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.669423Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.669852Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.673919Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node [2026-06-08T17:36:39.675166Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node [2026-06-08T17:36:39.734631Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.734699Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.735593Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.736069Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.741457Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node [2026-06-08T17:36:39.743171Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node [2026-06-08T17:36:39.850746Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.851703Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.855143Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node [2026-06-08T17:36:39.966421Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.967385Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.971331Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node [2026-06-08T17:36:39.983454Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:39.984322Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:39.988312Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node [2026-06-08T17:36:40.017109Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.018054Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.021945Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node [2026-06-08T17:36:40.022353Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.023110Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.026401Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node [2026-06-08T17:36:40.027327Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.028146Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.031551Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node [2026-06-08T17:36:40.092606Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.092717Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.093642Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.094141Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.099252Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node [2026-06-08T17:36:40.100683Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node [2026-06-08T17:36:40.159642Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.159750Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.160617Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.161164Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.165654Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node [2026-06-08T17:36:40.167330Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node [2026-06-08T17:36:40.226510Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.227472Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.231310Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node [2026-06-08T17:36:40.593259Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.594216Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.597963Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node [2026-06-08T17:36:40.658880Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.659809Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.663666Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node [2026-06-08T17:36:40.724469Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.725356Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.728998Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node [2026-06-08T17:36:40.790189Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:40.791067Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:40.794490Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node [2026-06-08T17:36:41.056366Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.057167Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.061593Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node [2026-06-08T17:36:41.121980Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.122847Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.126745Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node [2026-06-08T17:36:41.187657Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.188482Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.192197Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node [2026-06-08T17:36:41.252998Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.253063Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.253909Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.254613Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.259423Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node [2026-06-08T17:36:41.260810Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node [2026-06-08T17:36:41.419915Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.420758Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.424168Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node [2026-06-08T17:36:41.485106Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.485191Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.485946Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.486350Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.489899Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node [2026-06-08T17:36:41.490543Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node [2026-06-08T17:36:41.519626Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.520377Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.523737Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node [2026-06-08T17:36:41.524312Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.525020Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.525476Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.526734Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.530313Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node [2026-06-08T17:36:41.532369Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node [2026-06-08T17:36:41.593079Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.593157Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.593880Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.594223Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.597607Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node [2026-06-08T17:36:41.598730Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node [2026-06-08T17:36:41.626818Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.627566Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.630578Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node [2026-06-08T17:36:41.659500Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.660222Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.662912Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node [2026-06-08T17:36:41.692070Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.692773Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.695647Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node [2026-06-08T17:36:41.756851Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.757579Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.760946Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node [2026-06-08T17:36:41.773380Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.774080Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.777854Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node [2026-06-08T17:36:41.838600Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.839358Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.842707Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node [2026-06-08T17:36:41.904122Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.904835Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.908258Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node [2026-06-08T17:36:41.969333Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:41.970006Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:41.973528Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node [2026-06-08T17:36:42.034693Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.035445Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.039771Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node [2026-06-08T17:36:42.150819Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.151551Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.154627Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node [2026-06-08T17:36:42.183460Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.184165Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.187208Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node [2026-06-08T17:36:42.298343Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.299028Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.302726Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node [2026-06-08T17:36:42.363610Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.364289Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.368165Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node [2026-06-08T17:36:42.429033Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.429729Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.433467Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node [2026-06-08T17:36:42.694804Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.694885Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.695479Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.695935Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.699178Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node [2026-06-08T17:36:42.729145Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node [2026-06-08T17:36:42.760285Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.760352Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.760869Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.761570Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.765148Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node [2026-06-08T17:36:42.766660Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node [2026-06-08T17:36:42.826422Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.826500Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.826525Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.827093Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.827596Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.828380Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.832939Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node [2026-06-08T17:36:42.835158Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node [2026-06-08T17:36:42.836397Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node [2026-06-08T17:36:42.863839Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.864460Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.867850Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node [2026-06-08T17:36:42.868860Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.869489Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.872462Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node [2026-06-08T17:36:42.873531Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.874183Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.877366Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node [2026-06-08T17:36:42.906310Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.906917Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.910333Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node [2026-06-08T17:36:42.923312Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.923913Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.927181Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node [2026-06-08T17:36:42.940214Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.956273Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.956791Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:42.959737Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node [2026-06-08T17:36:42.961130Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:42.993229Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.057257Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.057765Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.061096Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node [2026-06-08T17:36:43.090249Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.204471Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.204541Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.205014Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.205481Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.208975Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node [2026-06-08T17:36:43.239561Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node [2026-06-08T17:36:43.270493Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.270574Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.384796Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.385334Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.388499Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node [2026-06-08T17:36:43.417764Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.932978Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.933523Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.936606Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node [2026-06-08T17:36:43.965781Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.966121Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:43.966349Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.966743Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.967310Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome' [2026-06-08T17:36:43.973982Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node [2026-06-08T17:36:43.975535Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node [2026-06-08T17:36:43.976942Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node [2026-06-08T17:36:44.001125Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:44.001432Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome' [2026-06-08T17:36:44.004809Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node [2026-06-08T17:36:44.005485Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:44.005540Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:44.005757Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome' [2026-06-08T17:36:44.008744Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node [2026-06-08T17:36:44.038155Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:44.038227Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:44.038442Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome' [2026-06-08T17:36:44.041546Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node [2026-06-08T17:36:44.070788Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome' [2026-06-08T17:36:46.490614Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow [2026-06-08T17:36:54.765781Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Strelka somatic workflow successfully completed. [2026-06-08T17:36:54.765781Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [2026-06-08T17:36:54.765781Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] workflow version: 2.9.10 [2026-06-08T17:36:54.765858Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] [2026-06-08T17:36:54.765866Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Workflow successfully completed all tasks [2026-06-08T17:36:54.765872Z] [nf-878efaa0b4aa244440d75fe95e964b5a-16f7b-6vlxf] [597_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec