File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/84a9a9682110744889426c3a0c6e28/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-a4s_uyou because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:08,613 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:09,465 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:09,634 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:10,674 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:10,743 - cnv_pipe.batch.run_model - INFO - Processing cluster 351 with 112 probes
2026-06-08 17:39:11,122 - cnv_pipe.batch.run_model.cluster351 - INFO - Child process started for cluster 351 with 112 probes
2026-06-08 17:39:48,199 - cnv_pipe.batch.run_model.cluster351 - INFO - Child process finished cluster 351. Wrote cluster_351_samples.csv and cluster_351_params.csv
2026-06-08 17:39:48,200 - cnv_pipe.batch.run_model - INFO - Cluster 351 finished in 37.46 seconds. Status: SUCCESS