File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/5f41fe05a8b16b0e911d496ab478f1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tg4le91_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:13,065 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:13,945 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:14,148 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:15,197 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:15,369 - cnv_pipe.batch.run_model - INFO - Processing cluster 1087 with 143 probes
2026-06-08 17:41:15,767 - cnv_pipe.batch.run_model.cluster1087 - INFO - Child process started for cluster 1087 with 143 probes
2026-06-08 17:42:01,448 - cnv_pipe.batch.run_model.cluster1087 - INFO - Child process finished cluster 1087. Wrote cluster_1087_samples.csv and cluster_1087_params.csv
2026-06-08 17:42:01,449 - cnv_pipe.batch.run_model - INFO - Cluster 1087 finished in 46.08 seconds. Status: SUCCESS