File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/9daffabb8d352d5f3cfdc54a3330ff/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-b9bpmy85 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:16,607 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:17,491 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:17,664 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:18,658 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:18,830 - cnv_pipe.batch.run_model - INFO - Processing cluster 754 with 183 probes
2026-06-08 17:40:19,213 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process started for cluster 754 with 183 probes
2026-06-08 17:41:15,148 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process finished cluster 754. Wrote cluster_754_samples.csv and cluster_754_params.csv
2026-06-08 17:41:15,149 - cnv_pipe.batch.run_model - INFO - Cluster 754 finished in 56.32 seconds. Status: SUCCESS