File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/636a19d2a362ca92b7356a2a06cc0a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qprcskrs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:40:28,297 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:40:29,059 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:40:29,218 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:40:30,045 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:40:30,179 - cnv_pipe.batch.run_model - INFO - Processing cluster 831 with 174 probes
2026-06-08 17:40:30,539 - cnv_pipe.batch.run_model.cluster831 - INFO - Child process started for cluster 831 with 174 probes
2026-06-08 17:41:20,162 - cnv_pipe.batch.run_model.cluster831 - INFO - Child process finished cluster 831. Wrote cluster_831_samples.csv and cluster_831_params.csv
2026-06-08 17:41:20,163 - cnv_pipe.batch.run_model - INFO - Cluster 831 finished in 49.98 seconds. Status: SUCCESS