sample_id,probe_id,observed_count,ppd_q2p5,ppd_q10,ppd_q25,ppd_q50,ppd_q75,ppd_q90,ppd_q97p5,ppd_std,ppd_median,ppd_mean,p_cn_0,p_cn_1,p_cn_2,p_cn_3,p_cn_4,norm_factor
Sig_18_Blood,82342,0.0,121.0,130.0,148.0,162.0,196.0,203.2,206.8,32.57975,162.0,166.40001,0.0003226573,0.12712635,0.7852505,0.08712314,0.00017738268,84.70724
HCC1395_BL,82342,0.0,134.8,149.2,178.0,181.0,185.0,198.2,204.8,25.245989,181.0,176.2,0.00032265668,0.12712622,0.78525066,0.0871231,0.00017738261,83.73157
HCC1395_tumor,82342,0.0,107.899994,110.600006,116.0,159.0,196.0,232.0,250.0,54.821163,159.0,166.8,0.00032265516,0.12712581,0.7852511,0.08712304,0.00017738248,80.476395
Sig_18_tissue,82342,0.0,152.8,155.20001,160.0,169.0,170.0,206.0,224.0,27.68682,169.0,176.2,0.00032265516,0.12712575,0.7852512,0.087123044,0.00017738249,79.898605
Sig_18_Blood,82343,0.0,73.8,85.2,108.0,174.0,180.0,193.2,199.8,49.58387,174.0,146.8,0.00032260653,0.1271264,0.78526336,0.08711046,0.00017722131,87.3411
HCC1395_BL,82343,0.0,68.2,86.8,124.0,163.0,171.0,267.59998,315.90002,89.52452,163.0,170.40001,0.00032260563,0.1271261,0.7852635,0.087110646,0.0001772217,86.33509
HCC1395_tumor,82343,0.0,81.6,83.4,87.0,92.0,104.0,162.2,191.3,44.645267,92.0,113.0,0.00032260254,0.12712502,0.7852637,0.08711147,0.00017722338,82.97871
Sig_18_tissue,82343,0.0,93.0,120.0,174.0,182.0,183.0,191.4,195.6,40.679234,182.0,164.0,0.00032260254,0.12712483,0.78526366,0.087111704,0.00017722385,82.38295
Sig_18_Blood,82344,0.0,177.4,181.6,190.0,204.0,209.0,228.8,238.7,22.130522,204.0,204.2,0.0003224983,0.12700883,0.78519374,0.08729661,0.000178274,101.47901
HCC1395_BL,82344,0.0,108.5,122.0,149.0,207.0,230.0,276.8,300.2,69.89878,207.0,199.6,0.00032249923,0.12700963,0.78519374,0.087295756,0.00017827224,100.31016
HCC1395_tumor,82344,0.0,140.5,157.0,190.0,192.0,201.0,257.4,285.6,51.732388,192.0,202.6,0.00032250353,0.1270123,0.78519374,0.08729317,0.00017825651,96.41048
Sig_18_tissue,82344,0.0,151.4,155.6,164.0,177.0,204.0,226.2,237.3,32.25771,177.0,187.2,0.00032250475,0.12701277,0.78519374,0.08729271,0.00017825558,95.718285
Sig_18_Blood,82345,0.0,66.799995,78.200005,101.0,146.0,209.0,248.0,267.5,75.46284,146.0,158.6,0.0003222724,0.12700523,0.7852429,0.087251574,0.0001779836,87.92839
HCC1395_BL,82345,0.0,67.399994,95.600006,152.0,166.0,191.0,199.4,203.6,51.639523,166.0,154.40001,0.00032227117,0.12700501,0.78524303,0.08725164,0.00017798373,86.91561
HCC1395_tumor,82345,0.0,73.0,79.0,91.0,156.0,183.0,195.6,201.9,51.687523,156.0,141.0,0.00032226808,0.12700424,0.7852433,0.087252244,0.00017798496,83.53666
Sig_18_tissue,82345,0.0,145.2,151.8,165.0,171.0,188.0,198.2,203.3,21.010473,171.0,174.40001,0.00032226747,0.12700409,0.7852434,0.08725226,0.00017798498,82.9369
Sig_18_Blood,82346,0.0,176.0,176.0,176.0,179.0,183.0,189.6,192.9,6.7111845,179.0,181.6,0.00032179285,0.12681328,0.78519064,0.08749502,0.00017924471,91.3388
HCC1395_BL,82346,0.0,87.1,87.4,88.0,108.0,193.0,214.0,224.5,58.45819,108.0,140.8,0.00032179285,0.12681328,0.7851905,0.087495126,0.00017924493,90.28674
HCC1395_tumor,82346,0.0,161.2,167.8,181.0,182.0,186.0,196.8,202.2,14.347126,182.0,182.40001,0.00032179223,0.1268132,0.78519046,0.08749524,0.00017924517,86.77673
Sig_18_tissue,82346,0.0,110.799995,122.200005,145.0,159.0,216.0,230.4,237.6,48.318115,159.0,173.40001,0.00032179253,0.1268132,0.78519046,0.08749524,0.00017924517,86.15371
Sig_18_Blood,82347,0.0,170.7,175.8,186.0,187.0,187.0,271.59998,313.90002,58.70128,187.0,211.40001,0.00032269544,0.12715214,0.78527117,0.08707695,0.0001770489,94.461975
HCC1395_BL,82347,0.0,142.09999,142.40001,143.0,160.0,196.0,202.59999,205.9,27.045147,160.0,169.6,0.00032269512,0.12715201,0.7852713,0.087077014,0.00017704905,93.37394
HCC1395_tumor,82347,0.0,127.399994,131.6,140.0,145.0,184.0,248.79999,281.2,60.443695,145.0,177.40001,0.00032269358,0.12715153,0.78527117,0.08707758,0.0001770502,89.74391
Sig_18_tissue,82347,0.0,145.7,150.8,161.0,197.0,208.0,249.4,270.1,46.098156,197.0,197.40001,0.0003226933,0.12715144,0.7852711,0.087077744,0.00017705052,89.09959
Sig_18_Blood,82348,0.0,110.99999,123.00001,147.0,199.0,219.0,234.0,241.5,49.68863,199.0,183.2,0.00032220728,0.12699118,0.78523767,0.087270886,0.00017808565,97.40226
HCC1395_BL,82348,0.0,162.0,168.0,180.0,198.0,199.0,206.8,210.7,18.048822,198.0,189.8,0.00032220603,0.12699078,0.78523767,0.087271295,0.00017808648,96.28036
HCC1395_tumor,82348,0.0,111.49999,128.0,161.0,174.0,181.0,257.8,296.2,66.81736,174.0,186.2,0.00032220356,0.12698938,0.7852375,0.08727282,0.00017810006,92.53734
Sig_18_tissue,82348,0.0,86.5,97.0,118.0,162.0,163.0,237.99998,275.5,69.355316,162.0,162.8,0.00032220356,0.12698913,0.78523743,0.087273106,0.00017810063,91.872955
Sig_18_Blood,82349,0.0,147.2,147.8,149.0,171.0,232.0,236.2,238.3,40.067944,171.0,187.6,0.00032235504,0.1270246,0.78523237,0.08724275,0.0001779447,90.20023
HCC1395_BL,82349,0.0,162.6,164.40001,168.0,202.0,223.0,248.2,260.80002,37.80476,202.0,204.0,0.00032235475,0.12702444,0.78523237,0.087242864,0.00017794494,89.16129
HCC1395_tumor,82349,0.0,150.6,152.4,156.0,157.0,196.0,265.0,299.5,60.732197,157.0,194.0,0.0003223529,0.12702388,0.7852324,0.087243386,0.00017794601,85.69504
Sig_18_tissue,82349,0.0,97.899994,103.600006,115.0,148.0,168.0,206.99998,226.5,47.619324,148.0,152.0,0.00032235228,0.12702376,0.7852324,0.087243505,0.00017794625,85.07978
Sig_18_Blood,82350,0.0,178.8,184.20001,195.0,205.0,270.0,350.4,390.6,83.059975,205.0,250.2,0.000322214,0.12692064,0.7851918,0.087386645,0.00017874027,99.379616
HCC1395_BL,82350,0.0,201.4,208.6,223.0,227.0,227.0,267.19998,287.30002,31.761612,227.0,234.0,0.00032221526,0.12692128,0.7851916,0.08738616,0.00017873928,98.23495
HCC1395_tumor,82350,0.0,168.09999,168.40001,169.0,175.0,244.0,273.4,288.1,50.42777,175.0,209.8,0.00032221831,0.12692343,0.7851912,0.08738444,0.00017873578,94.41594
Sig_18_tissue,82350,0.0,131.8,143.2,166.0,182.0,182.0,264.19998,305.30002,64.87403,182.0,195.40001,0.00032221893,0.12692381,0.78519106,0.0873842,0.00017873527,93.73807
Sig_18_Blood,82351,0.0,157.0,169.0,193.0,201.0,207.0,209.4,210.6,20.899761,201.0,193.0,0.0003226259,0.1271047,0.7852279,0.08716715,0.00017761314,108.08213
HCC1395_BL,82351,0.0,182.0,185.0,191.0,209.0,212.0,230.59999,239.90001,21.245235,209.0,207.2,0.0003226259,0.12710494,0.785228,0.087166764,0.00017761235,106.83722
HCC1395_tumor,82351,0.0,117.7,137.8,178.0,194.0,292.0,325.6,342.4,84.596924,194.0,224.6,0.0003226259,0.12710574,0.7852284,0.087165594,0.00017760995,102.68379
Sig_18_tissue,82351,0.0,117.799995,135.20001,170.0,180.0,189.0,214.2,226.8,38.31762,180.0,176.40001,0.0003226253,0.12710589,0.78522843,0.08716543,0.00017760963,101.94656
Sig_18_Blood,82352,0.0,96.5,119.0,164.0,179.0,192.0,193.8,194.7,38.97384,179.0,163.8,0.0003224574,0.12707071,0.7852506,0.087178625,0.00017762609,86.23904
HCC1395_BL,82352,0.0,148.9,151.6,157.0,190.0,216.0,250.8,268.2,45.47527,190.0,197.0,0.0003224565,0.1270704,0.7852506,0.087178916,0.00017762669,85.24572
HCC1395_tumor,82352,0.0,84.5,104.00001,143.0,147.0,169.0,224.79999,252.70001,59.442074,147.0,159.8,0.00032245374,0.12706932,0.78525084,0.087179795,0.0001776389,81.93169
Sig_18_tissue,82352,0.0,86.3,90.200005,98.0,148.0,207.0,217.8,223.2,56.166183,148.0,152.6,0.00032245374,0.12706912,0.78525084,0.087179966,0.00017763925,81.343445
Sig_18_Blood,82353,0.0,187.0,190.0,196.0,248.0,324.0,324.0,324.0,59.6845,248.0,255.6,0.00032257242,0.12710714,0.7852366,0.08715625,0.00017740836,86.87623
HCC1395_BL,82353,0.0,137.8,146.2,163.0,178.0,228.0,231.59999,233.4,38.076767,178.0,187.6,0.00032257207,0.127107,0.7852366,0.08715642,0.00017740871,85.87557
HCC1395_tumor,82353,0.0,103.5,114.00001,135.0,164.0,169.0,187.59999,196.90001,33.81479,164.0,153.6,0.00032257056,0.12710643,0.78523654,0.08715704,0.00017740998,82.537056
Sig_18_tissue,82353,0.0,141.6,146.4,156.0,160.0,204.0,207.0,208.5,27.571,160.0,173.8,0.00032257056,0.12710634,0.78523666,0.087157056,0.00017741001,81.944466
Sig_18_Blood,82354,0.0,126.299995,148.2,192.0,198.0,202.0,216.4,223.6,36.097645,198.0,187.40001,0.0003225841,0.12705866,0.78521097,0.08722995,0.00017789772,89.43776
HCC1395_BL,82354,0.0,87.6,107.4,147.0,167.0,179.0,222.2,243.8,54.72842,167.0,165.0,0.00032258502,0.12705925,0.7852109,0.08722937,0.00017789654,88.4076
HCC1395_tumor,82354,0.0,103.2,103.8,105.0,177.0,199.0,216.4,225.1,50.357124,177.0,162.40001,0.00032258808,0.12706135,0.78521085,0.0872273,0.00017788187,84.97064
Sig_18_tissue,82354,0.0,75.7,95.8,136.0,196.0,202.0,229.0,242.5,61.621426,196.0,170.0,0.0003225884,0.12706174,0.78521097,0.087226845,0.00017788094,84.36059
Sig_18_Blood,82355,0.0,94.5,111.0,144.0,150.0,154.0,168.4,175.6,29.366648,150.0,143.0,0.00032235536,0.12701985,0.7852456,0.08723431,0.0001778544,86.88703
HCC1395_BL,82355,0.0,144.49998,146.0,149.0,178.0,190.0,191.2,191.8,20.313541,178.0,170.6,0.00032235536,0.12701975,0.78524554,0.08723448,0.00017785474,85.88625
HCC1395_tumor,82355,0.0,115.99999,116.00001,116.0,159.0,202.0,204.4,205.6,39.37715,159.0,159.8,0.00032235475,0.12701942,0.78524524,0.087235086,0.00017785597,82.54732
Sig_18_tissue,82355,0.0,68.4,87.6,126.0,151.0,170.0,173.6,175.4,41.356983,151.0,137.0,0.00032235475,0.12701936,0.78524524,0.0872352,0.0001778562,81.95466
Sig_18_Blood,82356,0.0,99.299995,115.200005,147.0,167.0,217.0,235.0,244.0,53.58209,167.0,174.40001,0.000322609,0.12710938,0.78523874,0.087151825,0.00017744109,78.22465
HCC1395_BL,82356,0.0,127.59999,132.40001,142.0,147.0,162.0,187.2,199.8,26.520935,147.0,156.2,0.00032260868,0.12710935,0.7852388,0.08715183,0.0001774411,77.32364
HCC1395_tumor,82356,0.0,84.2,87.8,95.0,123.0,134.0,153.8,163.7,29.689056,123.0,120.4,0.00032260868,0.12710926,0.7852389,0.08715179,0.000177441,74.31759
Sig_18_tissue,82356,0.0,64.4,89.600006,140.0,155.0,161.0,211.4,236.6,60.161785,155.0,151.40001,0.00032260807,0.12710924,0.7852389,0.08715179,0.000177441,73.78402
Sig_18_Blood,82357,0.0,107.399994,120.600006,147.0,181.0,190.0,218.79999,233.2,45.04842,181.0,171.8,0.000322605,0.12711126,0.7852453,0.087143436,0.00017743444,86.29941
HCC1395_BL,82357,0.0,121.2,136.8,168.0,182.0,206.0,213.8,217.7,35.84634,182.0,178.2,0.00032260438,0.1271113,0.78524536,0.087143324,0.00017743421,85.3054
HCC1395_tumor,82357,0.0,136.9,145.6,163.0,184.0,191.0,195.2,197.3,23.177576,184.0,174.0,0.00032260377,0.12711148,0.7852456,0.08714289,0.00017743334,81.989044
Sig_18_tissue,82357,0.0,163.0,166.0,172.0,191.0,193.0,194.2,194.8,13.184839,191.0,182.6,0.00032260315,0.1271115,0.7852456,0.08714289,0.00017743334,81.40039
Sig_18_Blood,82358,0.0,157.1,157.40001,158.0,161.0,213.0,232.8,242.7,36.26017,161.0,187.0,0.00032257792,0.1271077,0.78524053,0.08715173,0.00017739915,81.166084
HCC1395_BL,82358,0.0,99.2,105.8,119.0,159.0,161.0,200.59999,220.40001,44.423416,159.0,152.6,0.00032257792,0.12710764,0.78524053,0.08715189,0.00017739949,80.23119
HCC1395_tumor,82358,0.0,74.1,92.4,129.0,163.0,180.0,202.79999,214.2,50.6857,163.0,151.6,0.0003225767,0.12710738,0.7852405,0.087152176,0.00017740007,77.11211
Sig_18_tissue,82358,0.0,74.0,89.0,119.0,132.0,201.0,213.59999,219.90001,55.894905,132.0,148.6,0.0003225767,0.12710729,0.7852404,0.08715229,0.00017740029,76.55847
Sig_18_Blood,82359,0.0,119.6,139.40001,179.0,191.0,199.0,206.2,209.8,34.4186,191.0,178.6,0.00032240115,0.12705047,0.78524315,0.087206215,0.00017770317,95.043945
HCC1395_BL,82359,0.0,99.1,117.4,154.0,180.0,193.0,213.4,223.6,44.857998,180.0,169.40001,0.00032240053,0.1270502,0.7852432,0.08720645,0.00017770365,93.94921
HCC1395_tumor,82359,0.0,165.5,167.00002,170.0,179.0,197.0,253.99998,282.5,46.983402,179.0,200.6,0.00032239838,0.1270493,0.78524333,0.08720722,0.00017770522,90.29682
Sig_18_tissue,82359,0.0,138.9,147.6,165.0,188.0,210.0,248.4,267.6,46.680187,188.0,194.6,0.0003223981,0.12704913,0.78524333,0.087207444,0.00017770568,89.64852
Sig_18_Blood,82360,0.0,170.4,171.6,174.0,187.0,204.0,204.0,204.0,14.372196,187.0,187.8,0.00032276803,0.1271634,0.7852504,0.0870863,0.00017717216,89.25227
HCC1395_BL,82360,0.0,72.0,93.0,135.0,176.0,200.0,200.59999,200.9,51.149193,176.0,155.40001,0.00032276742,0.12716343,0.78525054,0.08708614,0.00017717185,88.22425
HCC1395_tumor,82360,0.0,178.8,181.2,186.0,188.0,191.0,192.8,193.7,5.4258637,188.0,187.40001,0.0003227662,0.12716353,0.78525084,0.08708572,0.00017717096,84.79442
Sig_18_tissue,82360,0.0,102.2,114.8,140.0,187.0,187.0,191.8,194.2,37.194626,187.0,161.40001,0.0003227662,0.12716356,0.7852509,0.08708561,0.00017717076,84.18563
Sig_18_Blood,82361,0.0,117.2,132.8,164.0,196.0,199.0,200.8,201.7,34.16197,196.0,174.6,0.00032265234,0.12710999,0.785239,0.0871509,0.0001774705,89.33481
HCC1395_BL,82361,0.0,143.3,144.2,146.0,159.0,184.0,203.2,212.8,27.33935,159.0,169.6,0.00032265205,0.12711024,0.78523904,0.08715062,0.00017746992,88.30583
HCC1395_tumor,82361,0.0,78.6,83.4,93.0,162.0,169.0,234.4,267.1,71.13199,162.0,155.8,0.00032265234,0.12711114,0.7852391,0.08714965,0.00017746794,84.87283
Sig_18_tissue,82361,0.0,156.09999,156.40001,157.0,159.0,168.0,196.79999,211.20001,22.798244,159.0,171.2,0.00032265234,0.12711127,0.78523916,0.08714943,0.00017746749,84.26348