File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/31c0d923ee9417933f056f3ff93f61/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xf2kou8x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:35,037 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:35,895 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:36,073 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:37,088 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:37,255 - cnv_pipe.batch.run_model - INFO - Processing cluster 1220 with 189 probes
2026-06-08 17:41:37,635 - cnv_pipe.batch.run_model.cluster1220 - INFO - Child process started for cluster 1220 with 189 probes
2026-06-08 17:42:35,661 - cnv_pipe.batch.run_model.cluster1220 - INFO - Child process finished cluster 1220. Wrote cluster_1220_samples.csv and cluster_1220_params.csv
2026-06-08 17:42:35,663 - cnv_pipe.batch.run_model - INFO - Cluster 1220 finished in 58.41 seconds. Status: SUCCESS