File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/4736ad0eb58cd3cf2751d949554d97/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0ym_z2wq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:42:07,278 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:42:08,150 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:42:08,325 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:42:09,335 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:42:09,559 - cnv_pipe.batch.run_model - INFO - Processing cluster 1164 with 189 probes
2026-06-08 17:42:10,009 - cnv_pipe.batch.run_model.cluster1164 - INFO - Child process started for cluster 1164 with 189 probes
2026-06-08 17:43:09,118 - cnv_pipe.batch.run_model.cluster1164 - INFO - Child process finished cluster 1164. Wrote cluster_1164_samples.csv and cluster_1164_params.csv
2026-06-08 17:43:09,120 - cnv_pipe.batch.run_model - INFO - Cluster 1164 finished in 59.56 seconds. Status: SUCCESS