mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c8x3m6b1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:39:09,389 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:39:10,288 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:39:10,464 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:39:11,461 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:39:11,635 - cnv_pipe.batch.run_model - INFO - Processing cluster 355 with 138 probes
2026-06-08 17:39:12,025 - cnv_pipe.batch.run_model.cluster355 - INFO - Child process started for cluster 355 with 138 probes
2026-06-08 17:39:56,240 - cnv_pipe.batch.run_model.cluster355 - INFO - Child process finished cluster 355. Wrote cluster_355_samples.csv and cluster_355_params.csv
2026-06-08 17:39:56,241 - cnv_pipe.batch.run_model - INFO - Cluster 355 finished in 44.61 seconds. Status: SUCCESS