File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/a9d9a45b4dbfb1cda0181c2a9ce795/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o8ylypgg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 17:41:32,534 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 17:41:33,413 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 17:41:33,590 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 17:41:34,603 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 17:41:34,809 - cnv_pipe.batch.run_model - INFO - Processing cluster 1204 with 183 probes
2026-06-08 17:41:35,196 - cnv_pipe.batch.run_model.cluster1204 - INFO - Child process started for cluster 1204 with 183 probes
2026-06-08 17:42:31,499 - cnv_pipe.batch.run_model.cluster1204 - INFO - Child process finished cluster 1204. Wrote cluster_1204_samples.csv and cluster_1204_params.csv
2026-06-08 17:42:31,500 - cnv_pipe.batch.run_model - INFO - Cluster 1204 finished in 56.69 seconds. Status: SUCCESS